Quickstart ========================================= ------------------------ Getting Started ------------------------ If not to be integrated into a workflow, **FinaleToolkit** is intended to be run directly from a terminal interface. You can open the terminal and typing the following command:: $ finaletoolkit ------------------------ Importing Modules ------------------------ The **FinaleToolkit** package itself is divided by its API functions. FinaleToolkit has the following modules: * `frag` - fragmentomic feature genereation * `genome` - utilities for genome tracks * `cli` - command line interface * `utils` - utilities that simplify feature generation You can load *all* fragmentomics functions by using the following command:: >>> import finaletoolkit.frag as ft If you want to load a *specific* function, you can do so by using the following: Assuming we wanted to load the DELFI function:: >>> from finaletoolkit.frag import delfi