Key Features#

  • Finaletoolkit Support: Implements most Finaletoolkit CLI commands (excluding gap-bed and delfi-gc-correct).

  • File Compatibility: Works with BED, BAM, and CRAM files.

  • Mappability Filtering: Filters interval files based on mappability scores.

  • Parallelization: Supports multi-core processing.

  • SLURM Integration: Enables job submission to SLURM clusters.

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